Development of A Biomedical Imaging Informatics System for Diagnosis and Treatment Planning
Quantitative analysis of numerical solvers for oscillatory biomolecular system models
Abstract
Background
This article provides guidelines for selecting optimal numerical solvers for biomolecular system models. Because various parameters of the same system could have drastically different ranges from 10-15 to 1010, the ODEs can be stiff and ill-...
Quantitative analysis of numerical solvers for oscillatory biomolecular system models
Win percentage: a novel measure for assessing the suitability of machine classifiers for biological problems
Abstract
Background
Selecting an appropriate classifier for a particular biological application poses a difficult problem for researchers and practitioners alike. In particular, choosing a classifier depends heavily on the features selected. For high-throughput biomedical datasets, ...
ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses
Abstract
Background
A survey of microarray databases reveals that most of the repository contents and data models are heterogeneous (i.e., data obtained from different chip manufacturers), and that the repositories provide only basic biological keywords linking to PubMed. As a resul...